Stem-loop dps-mir-2518-4

Accession

MI0011645

Description

Drosophila pseudoobscura dps-mir-2518-4 precursor miRNA

Sequence

cggccaacgggcagccacacacacacacacgaccggaucgaacccguugcgaaucgaacuugguuugaguUCGAGCAGCGGGUCGAUCCGAGCcauagcccagcc
.(((....((((..................(..((((((((.((((((((...((((((((.....))))))))))))))))))))))))..)....)))).)))

Structure

c   caac    agccacacacacacacac ac        a        gaa        g 
 ggc    gggc                  g  cggaucga cccguugc   ucgaacuu g
 |||    ||||                  |  |||||||| ||||||||   |||||||| u
 ccg    cccg                  C  GCCUAGCU GGGCGACG   AGCUugag u
-   ---a    --------------auac GA        -        ---        u 

Annotation confidence Not enough data

Genome context

Unknown_group_95: 5483-5587 [+]

Mature dps-miR-2518

• Accession: MIMAT0012301
• Description: Drosophila pseudoobscura dps-miR-2518 mature miRNA
• Sequence: 71 - UCGAGCAGCGGGUCGAUCCGAGC - 93
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9