Stem-loop dps-mir-2528-2

Accession

MI0011651

Description

Drosophila pseudoobscura dps-mir-2528-2 precursor miRNA

Sequence

acggaauuuuacguauuuauccgUUUUGUCUGUAUCGCGAAGUUUGGagucguuuuuguugaagcgauuccacgcauuuucgaguacugauauuuuggcuugacaauaagaggccguu
((((..(((((.((......(((...((((.((((((.(((((.((((((((((((....)))))))))))).)).))).))).))).))))...)))....))..)))))..)))).

Structure

-    aa     -c  auuuau   UUU    U   -   C   -  U            u 
 acgg  uuuua  gu      ccg   UGUC GUA UCG GAA GU UGGagucguuuu g
 ||||  |||||  ||      |||   |||| ||| ||| ||| || ||||||||||||  
 ugcc  agaau  ca      ggu   auag cau agc uuu cg accuuagcgaag u
u    gg     aa  --guuc   uuu    u   g   u   a  c            u 

Annotation confidence Not enough data

Genome context

Unknown_singleton_1587: 1510-1627 [+]

Mature dps-miR-2528

• Accession: MIMAT0012306
• Description: Drosophila pseudoobscura dps-miR-2528 mature miRNA
• Sequence: 24 - UUUUGUCUGUAUCGCGAAGUUUGG - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9