miRBase entry: dps-mir-2528-2

Dead hairpin entry

Stem-loop dps-mir-2528-2


Accession
MI0011651
Description
Drosophila pseudoobscura dps-mir-2528-2 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

530 reads, 12.0 reads per million, 19 experiments
acggaauuuuacguauuuauccgUUUUGUCUGUAUCGCGAAGUUUGGAgucguuuuuguugaagcgauuccacgcauuuucgaguacUGAUAUUUUGGCUUGACAAUAagaggccguu
((((..(((((.((......(((...((((.((((((.(((((.((((((((((((....)))))))))))).)).))).))).))).))))...)))....))..)))))..)))).

Structure
-    aa     -c  auuuau   UUU    U   -   C   -  U            u 
 acgg  uuuua  gu      ccg   UGUC GUA UCG GAA GU UGGAgucguuuu g
 ||||  |||||  ||      |||   |||| ||| ||| ||| || ||||||||||||  
 ugcc  agaAU  CA      GGU   AUAG cau agc uuu cg accuuagcgaag u
u    gg     AA  --GUUC   UUU    U   g   u   a  c            u