miRBase entry: dps-mir-2528-1

Dead hairpin entry

Stem-loop dps-mir-2528-1


Accession
MI0011662
Description
Drosophila pseudoobscura dps-mir-2528-1 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

808 reads, 14.0 reads per million, 19 experiments
acggaauuuuacguauucauccgUUUUGUCUGUAUCGCGAAGUUUGGAgucguuuuuguugaagcgauuccacgcauuuuuugagugcugauauuuuggcUUGAAAAUAAGAGGCCGU
((((..(((((....((((.(((...((((.((((((.(((((.((((((((((((....))))))))))))...))))).))).))).))))...)))..))))..)))))..))))

Structure
    aa     cgua    -u   UUU    U   -   C     --U            u 
acgg  uuuua    uuca  ccg   UGUC GUA UCG GAAGU   UGGAgucguuuu g
||||  |||||    ||||  |||   |||| ||| ||| |||||   ||||||||||||  
UGCC  AGAAU    AAGU  ggu   auag cgu agu uuuua   accuuagcgaag u
    GG     --AA    Uc   uuu    u   g   u     cgc            u