Stem-loop dps-mir-2532

Accession

MI0011666

Description

Drosophila pseudoobscura dps-mir-2532 precursor miRNA

Sequence

397 reads, 6.0 reads per million, 11 experiments

aggauuuuucccagcuccgagagguucucgaggcagguagccuccuggUGGGCCUUGCUCUUCUUGGGCGGCGUUUGCCUCUGGGAACuucccgggcuggcugggucc
.((((((...(((((.(((.(((((((((((((((((..((((((.((.((((...))))..)).))).))).)))))))).))))))))).))))))))..))))))

Structure

a      uuc     u   a         -        ua   -   u  -U    C 
 ggauuu   ccagc ccg gagguucuc gaggcagg  gcc ucc gg  GGGC  
 ||||||   ||||| ||| ||||||||| ||||||||  ||| ||| ||  |||| U
 ccuggg   ggucg ggc cuuCAAGGG CUCCGUUU  CGG GGG UC  CUCG  
-      -uc     -   c         U        -G   C   U  UU    U 

Annotation confidence Low

Genome context

ref|NC_046683.1|: 19161343-19161450 [-]

Mature dps-miR-2532-5p

• Accession: MIMAT0053446
• Description: Drosophila pseudoobscura dps-miR-2532-5p mature miRNA
• Sequence: 49 - UGGGCCUUGCUCUUCUUGGGCG - 70
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2532-3p

• Accession: MIMAT0012321
• Description: Drosophila pseudoobscura dps-miR-2532-3p mature miRNA
• Sequence: 65 - UGGGCGGCGUUUGCCUCUGGGAAC - 88
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9