miRBase entry: dps-mir-2533

Dead hairpin entry

Stem-loop dps-mir-2533


Accession
MI0011667
Description
Drosophila pseudoobscura dps-mir-2533 precursor miRNA
Comment
The pattern of deep sequencing reads mapping to this locus does not support its annotation as a microRNA.


Sequence

1122 reads, 19.0 reads per million, 19 experiments
cgcgauguuggcuggaguguucUUCUGGCAGUUGGCCGGCCCAUCuucguccucgcucacguccgaguaugggcccgucguggccagcucggccUCCAGUUGGCGGUUUAGC
.((..((((((((((((.(((...(((((...((((.(((((((.((((....((....))..)))).))))))).))))..)))))...))))))))))))))).....))

Structure
c  ---ga            u   cUU     AGU    C       C    uccu  c 
 gc     uguuggcuggag guu   CUGGC   UGGC GGCCCAU uucg    cg u
 ||     |||||||||||| |||   |||||   |||| ||||||| ||||    ||  
 CG     GCGGUUGACCUc cgg   gaccg   gcug ccgggua gagc    gc c
-  AUUUG            -   cuc     -gu    c       u    --cu  a