Stem-loop dps-mir-2533

Accession

MI0011667

Description

Drosophila pseudoobscura dps-mir-2533 precursor miRNA

Sequence

cgcgauguuggcuggaguguucUUCUGGCAGUUGGCCGGCCCAUCuucguccucgcucacguccgaguaugggcccgucguggccagcucggccuccaguuggcgguuuagc
.((..((((((((((((.(((...(((((...((((.(((((((.((((....((....))..)))).))))))).))))..)))))...))))))))))))))).....))

Structure

c  ---ga            u   cUU     AGU    C       C    uccu  c 
 gc     uguuggcuggag guu   CUGGC   UGGC GGCCCAU uucg    cg u
 ||     |||||||||||| |||   |||||   |||| ||||||| ||||    ||  
 cg     gcgguugaccuc cgg   gaccg   gcug ccgggua gagc    gc c
-  auuug            -   cuc     -gu    c       u    --cu  a 

Annotation confidence Not enough data

Genome context

Unknown_singleton_3388: 114-225 [-]

Mature dps-miR-2533

• Accession: MIMAT0012322
• Description: Drosophila pseudoobscura dps-miR-2533 mature miRNA
• Sequence: 23 - UUCUGGCAGUUGGCCGGCCCAUC - 45
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9