Stem-loop dps-mir-2545a

Accession

MI0011687

Description

Drosophila pseudoobscura dps-mir-2545a precursor miRNA

Sequence

uccuccucaaggaggaAAUUCUUCUACUGCGCGAGGGcauagggcagauucucaauauucccugggcucugcuguccgaugccCUCACGCAGUACAAGAAUUUCcuccucgaggagga
((((((((.((((((((((((((.(((((((.((((((((.((((((...((((........)))).....)))))).)))))))).))))))).)))))))))))))).))))))))

Structure

        a              C       C        a      --auu    aua 
uccuccuc aggaggaAAUUCUU UACUGCG GAGGGcau gggcag     cuca   u
|||||||| |||||||||||||| ||||||| |||||||| ||||||     ||||    
aggaggag uccucCUUUAAGAA AUGACGC CUCccgua ccuguc     gggu   u
        c              C       A        g      gucuc    ccc 

Annotation confidence Not enough data

Genome context

XL_group1e: 1655246-1655363 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from dps-mir-2545a

Mature dps-miR-2545a-5p

• Accession: MIMAT0012350
• Description: Drosophila pseudoobscura dps-miR-2545a-5p mature miRNA
• Sequence: 17 - AAUUCUUCUACUGCGCGAGGG - 37
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2545a-3p

• Accession: MIMAT0012351
• Description: Drosophila pseudoobscura dps-miR-2545a-3p mature miRNA
• Sequence: 84 - CUCACGCAGUACAAGAAUUUC - 104
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9