Stem-loop dps-mir-2570

Accession

MI0011719

Description

Drosophila pseudoobscura dps-mir-2570 precursor miRNA

Sequence

1492 reads, 13.0 reads per million, 20 experiments

gcgucuugcaugugggacaggUAGUAUGGGUCUUGACAUGUGACUcaauacaaguuuugugaaacucguggcugcacuuUGUUUUCAAUGUAGGAGCCGAAGC
((.((((((((..((((((((((((((((((.((.(((...((((.......)))).))).)))))))).)))))...)))))))..))))))))))......

Structure

------  g        gu       ---     -      C  G   UGU    ca 
      gc ucuugcau  gggacag   gUAGU AUGGGU UU ACA   GACU  a
      || ||||||||  |||||||   ||||| |||||| || |||   ||||  u
      CG AGGAUGUA  UUUUGUu   cgucg ugcuca aa ugu   uuga  a
CGAAGC  -        AC       uca     g      -  g   --u    ac 

Annotation confidence Low

Genome context

ref|NC_046683.1|: 18996206-18996308 [-]

Mature dps-miR-2570-5p

• Accession: MIMAT0012410
• Description: Drosophila pseudoobscura dps-miR-2570-5p mature miRNA
• Sequence: 22 - UAGUAUGGGUCUUGACAUGUGACU - 45
• Evidence: experimental ; Illumina [1]

Mature dps-miR-2570-3p

• Accession: MIMAT0012411
• Description: Drosophila pseudoobscura dps-miR-2570-3p mature miRNA
• Sequence: 80 - UGUUUUCAAUGUAGGAGCCGAAGC - 103
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9