miRBase entry: dsi-mir-991

Stem-loop dsi-mir-991

Accession

MI0011733

Description

Drosophila simulans dsi-mir-991 precursor miRNA

Sequence

ggguauaucaaaaauaucacugcaguuucaggcuuUUCCCAACUACAUCUAUUAAUAUuuauuuuaacgucguaUUAAAGUUGAAGUUUGGAAAAUuuugguuuugcauuugaaaucc
((((...(((((........(((((..(((((.((((((.((((.((.((.(((((((.............))))))))).)).)))).)))))).)))))..)))))))))).))))

Structure

    aua     aauaucac     uu     c      C    A  U  A       uuauu 
gggu   ucaaa        ugcag  ucagg uuUUCC AACU CA CU UUAAUAU     u
||||   |||||        |||||  ||||| |||||| |||| || || |||||||     u
ccua   aguuu        acguu  gguuu AAAAGG UUGA GU GA AAUUaug     a
    --a     --------     uu     U      U    A  U  -       cugca

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chr2R: 15134391-15134508 [-]

Clustered miRNAs

8 other miRNAs are < 10 kb from dsi-mir-991

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature dsi-miR-991-5p

Accession	MIMAT0012429
Description	Drosophila simulans dsi-miR-991-5p mature miRNA
Sequence	36 - UUCCCAACUACAUCUAUUAAUAU - 58
Evidence	experimental Illumina [1-2]

Mature dsi-miR-991-3p

Accession	MIMAT0012430
Description	Drosophila simulans dsi-miR-991-3p mature miRNA
Sequence	75 - UUAAAGUUGAAGUUUGGAAAAU - 96
Evidence	experimental Illumina [1-2]

References

PubMed ID: 20037610
Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
"Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
"Nat Genet (2010) 42:6-9

PubMed ID: 24985917
Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
"Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
"Genome Res (2014) 24:1236-1250