Stem-loop dsi-mir-1002

Accession

MI0011738

Description

Drosophila simulans dsi-mir-1002 precursor miRNA

Sequence

ggaaauauuuagaaauuauauauUUAAGUAGUGGAUACAAAAGGCGAuuugauauaaaaguauCGCAUUGUAUGGCCUACUUAACUagcugauuuuguauucc
((((.(((...(((((((..((.((((((((...((((((...(((((.............))))).))))))...)))))))).))..))))))))))))))

Structure

    a   uua       ua  u        UGG      AAG     uugau 
ggaa uau   gaaauua  ua UUAAGUAG   AUACAA   GCGAu     a
|||| |||   |||||||  || ||||||||   ||||||   |||||     u
ccuu aug   uuuuagu  aU AAUUCAUC   UAUGUU   CGCua     a
    -   ---       cg  C        CGG      --A     ugaaa 

Annotation confidence Not enough data

Genome context

chr2L: 13506522-13506624 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-1002

Mature dsi-miR-1002-5p

• Accession: MIMAT0012439
• Description: Drosophila simulans dsi-miR-1002-5p mature miRNA
• Sequence: 24 - UUAAGUAGUGGAUACAAAAGGCGA - 47
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-1002-3p

• Accession: MIMAT0012440
• Description: Drosophila simulans dsi-miR-1002-3p mature miRNA
• Sequence: 64 - CGCAUUGUAUGGCCUACUUAACU - 86
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9