Stem-loop dsi-mir-968

Accession

MI0011739

Description

Drosophila simulans dsi-mir-968 precursor miRNA

Sequence

uuguucauggaagcuuccuUAAGUAGUAUCCAUUAAAGGGUUGuucucaacaugcaaaucaACCGUUUGAUGUACUACUUUAGgaaucuacagucaaa
(((....((((...(((((.((((((((..(((((((.(((((................))))).))))))))))))))).)))))))))....))).

Structure

-   uuca    agc     U        UC       G     uucucaa 
 uug    ugga   uuccu AAGUAGUA  CAUUAAA GGUUG       c
 |||    ||||   ||||| ||||||||  ||||||| |||||        
 aac    aucu   aagGA UUCAUCAU  GUAGUUU CCAac       a
a   ugac    ---     U        --       G     uaaacgu 

Annotation confidence Not enough data

Genome context

chr2L: 13506683-13506780 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from dsi-mir-968

Mature dsi-miR-968-5p

• Accession: MIMAT0012441
• Description: Drosophila simulans dsi-miR-968-5p mature miRNA
• Sequence: 20 - UAAGUAGUAUCCAUUAAAGGGUUG - 43
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-968-3p

• Accession: MIMAT0012442
• Description: Drosophila simulans dsi-miR-968-3p mature miRNA
• Sequence: 62 - ACCGUUUGAUGUACUACUUUAG - 83
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9