Stem-loop dsi-mir-999

Accession

MI0011746

Description

Drosophila simulans dsi-mir-999 precursor miRNA

Sequence

ggaugccgcucaauuaccccgACAUAGUCGUACGGUGAAUGUUGuguauuggagaccaaUGUUAACUGUAAGACUGUGUCUcggugguugccagcccagcc
....((.(((((((((((..(((((((((.((((((.(((((((.((.......))))))))).)))))).)))))))))..))))))))..)))...)).

Structure

ggau  --c   --        cc         G      G       u  au 
    gc   gcu  caauuacc  gACAUAGUC UACGGU AAUGUUG gu  u
    ||   |||  ||||||||  ||||||||| |||||| ||||||| ||  g
    cg   cga  guuggugg  CUGUGUCAG AUGUCA UUGUaac ca  g
---c  acc   cc        cU         A      A       -  ga 

Annotation confidence Not enough data

Genome context

chr3R: 17429603-17429703 [-]

Mature dsi-miR-999-5p

• Accession: MIMAT0012455
• Description: Drosophila simulans dsi-miR-999-5p mature miRNA
• Sequence: 22 - ACAUAGUCGUACGGUGAAUGUUG - 44
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-999-3p

• Accession: MIMAT0012456
• Description: Drosophila simulans dsi-miR-999-3p mature miRNA
• Sequence: 60 - UGUUAACUGUAAGACUGUGUCU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9