Stem-loop dsi-mir-963

Accession

MI0011755

Description

Drosophila simulans dsi-mir-963 precursor miRNA

Sequence

uacuacugauuuucuuagucuaaucuaaaACAAGGUAAAUAUCAGGUUGUUUCcuguauuagaucgaAACAUCUGUAUAUACCUUUGAUccgguuggacaaaagugcaucuucuagug
(((((..(((...(((.((((((((......((((((.(((.(((((.(((((............))))))))))))).))))))......))))))))..)))...)))...)))))

Structure

     -cu   uuu   -a        uaaaAC      A   U     U     cugua 
uacua   gau   cuu  gucuaauc      AAGGUA AUA CAGGU GUUUC     u
|||||   |||   |||  ||||||||      |||||| ||| ||||| |||||      
gugau   cua   gaa  cagguugg      UUCCAU UAU GUCUA CAAag     u
     cuu   cgu   aa        ccUAGU      A   -     -     cuaga 

Annotation confidence Not enough data

Genome context

chr2L: 5435040-5435157 [+]

Clustered miRNAs

5 other miRNAs are < 10 kb from dsi-mir-963

Mature dsi-miR-963-5p

• Accession: MIMAT0012473
• Description: Drosophila simulans dsi-miR-963-5p mature miRNA
• Sequence: 30 - ACAAGGUAAAUAUCAGGUUGUUUC - 53
• Evidence: experimental ; Illumina [1]

Mature dsi-miR-963-3p

• Accession: MIMAT0012474
• Description: Drosophila simulans dsi-miR-963-3p mature miRNA
• Sequence: 68 - AACAUCUGUAUAUACCUUUGAU - 89
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9