Stem-loop dsi-mir-982a

Accession

MI0011784

Description

Drosophila simulans dsi-mir-982a precursor miRNA

Sequence

cgaaaucaugcuagaucaUUAACAAGUAUCAUGUAAAUUGAAuuuuuguauauaucAAUUACAUGUUAUUCGUUCUUGaacuuaaugguuuu
.((((((((...((.(((..(((.((((.(((((((.((((((........)).))))))))))).)))).)))..))).))..))))))))

Structure

c        gcu  a   UU   A    U       A    -  uuu 
 gaaaucau   ag uca  AAC AGUA CAUGUAA UUGA Au   u
 ||||||||   || |||  ||| |||| ||||||| |||| ||    
 uuuuggua   uc aGU  UUG UUAU GUACAUU AAcu ua   g
-        -au  a   UC   C    U       -    a  uau 

Annotation confidence Not enough data

Genome context

chrX: 3274561-3274652 [-]

Clustered miRNAs

7 other miRNAs are < 10 kb from dsi-mir-982a

Mature dsi-miR-982a-5p

• Accession: MIMAT0012515
• Description: Drosophila simulans dsi-miR-982a-5p mature miRNA
• Sequence: 19 - UUAACAAGUAUCAUGUAAAUUGAA - 42
• Evidence: experimental ; Illumina [1-2]

Mature dsi-miR-982a-3p

• Accession: MIMAT0037361
• Description: Drosophila simulans dsi-miR-982a-3p mature miRNA
• Sequence: 57 - AAUUACAUGUUAUUCGUUCUUG - 78
• Evidence: experimental ; Illumina [2]

References

1. PubMed ID: 20037610
   Evolutionary flux of canonical microRNAs and mirtrons in Drosophila
   "Berezikov E, Liu N, Flynt AS, Hodges E, Rooks M, Hannon GJ, Lai EC"
   "Nat Genet (2010) 42:6-9


2. PubMed ID: 24985917
   Diversity of miRNAs, siRNAs, and piRNAs across 25 Drosophila cell lines
   "Wen J, Mohammed J, Bortolamiol-Becet D, Tsai H, Robine N, Westholm JO, Ladewig E, Dai Q, Okamura K, Flynt AS, Zhang D, Andrews J, Cherbas L, Kaufman TC, Cherbas P, Siepel A, Lai EC"
   "Genome Res (2014) 24:1236-1250