Stem-loop bta-mir-19b-2

Accession

MI0012209

Description

Bos taurus bta-mir-19b-2 precursor miRNA mir-19

Gene
family

RF00245; mir-19

Literature search

7 open access papers mention bta-mir-19b-2
(15 sentences)

Sequence

2140496 reads, 583.0 reads per million, 318 experiments

acugcuacuuacaguuAGUUUUGCUGGUUUGCAUUUCAGCguguggauauauggcUGUGCAAAUCCAUGCAAAACUGAuugug
.........((((((((((((((((((((((((...((((((((....)))).)))))))))).))).)))))))))))))))

Structure

acugcuacu               -   -      UUU    -    g 
         uacaguuAGUUUUGC UGG UUUGCA   CAGC gugu g
         ||||||||||||||| ||| ||||||   |||| ||||  
         guguuAGUCAAAACG ACC AAACGU   GUcg uaua a
---------               U   U      ---    g    u 

Annotation confidence High

Genome context

X: 17975810-17975892 [-]

Clustered miRNAs

5 other miRNAs are < 10 kb from bta-mir-19b-2

Mature bta-miR-19b-2-5p

• Accession: MIMAT0050957
• Description: Bos taurus bta-miR-19b-2-5p mature miRNA
• Sequence: 17 - AGUUUUGCUGGUUUGCAUUUCAGC - 40
• Evidence: experimental ; cloned [2]

Mature bta-miR-19b-3p

• Accession: MIMAT0004337
• Description: Bos taurus bta-miR-19b-3p mature miRNA
• Sequence: 56 - UGUGCAAAUCCAUGCAAAACUGA - 78
• Evidence: experimental ; cloned [2]

References

1. PubMed ID: 19267191
   Identification and characteristics of cattle microRNAs by homology searching and small RNA cloning
   "Long JE, Chen HX"
   "Biochem Genet (2009) 47:329-343


2. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90