Stem-loop bta-mir-450a-1

Accession

MI0012213

Description

Bos taurus bta-mir-450a-1 precursor miRNA mir-450

Gene
family

RF00708; mir-450

Literature search

5 open access papers mention bta-mir-450a-1
(7 sentences)

Sequence

3936 reads, 55 reads per million, 67 experiments

acuauUUUUGCGAUGUGUUCCUAAUAUgcaguauaaauauauugggagcauuuugcaugcaugguuuuguaucaauauacag
(((((...(((((.((((((((((((((.........)))))))))))))).)))))...)))))..(((((....))))).

Structure

-----------------     UUU     U              cag 
                 acuau   UGCGA GUGUUCCUAAUAUg   u
                 |||||   ||||| ||||||||||||||   a
                 uggua   acguu uacgaggguuauau   u
gacauauaacuauguuu     cgu     u              aaa 

Annotation confidence Not enough data

Genome context

chrX: 18282042-18282123 [-]

Clustered miRNAs

6 other miRNAs are < 10 kb from bta-mir-450a-1

Mature bta-miR-450a

• Accession: MIMAT0003834
• Description: Bos taurus bta-miR-450a mature miRNA
• Sequence: 6 - UUUUGCGAUGUGUUCCUAAUAU - 27
• Evidence: experimental ; cloned [1]

References

1. PubMed ID: 19758457
   Characterization of bovine miRNAs by sequencing and bioinformatics analysis
   Jin W, Grant JR, Stothard P, Moore SS, Guan LL
   BMC Mol Biol (2009) 10:90