Stem-loop bmo-mir-2758

Accession

MI0012312

Description

Bombyx mori bmo-mir-2758 precursor miRNA

Literature search

1 open access papers mention bmo-mir-2758
(1 sentences)

Sequence

8112 reads, 1771 reads per million, 3 experiments

aguuuagaagACUUGGUAGAACACGUAGUAAGcagguggaaucuCCCUGCGUGUUCUACCAAGUUAucuagguugg
..((((((.(((((((((((((((((((...(.((((...))))).))))))))))))))))))).))))))....

Structure

--ag      a                   UAA c    g 
    uuuaga gACUUGGUAGAACACGUAG   G aggu  
    |||||| |||||||||||||||||||   | |||| g
    ggaucu UUGAACCAUCUUGUGCGUC   C ucua  
gguu      A                   --C -    a 

Annotation confidence Medium

Genome context

NW_004582035.1: 2816104-2816179 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from bmo-mir-2758

Mature bmo-miR-2758-5p

• Accession: MIMAT0013629
• Description: Bombyx mori bmo-miR-2758-5p mature miRNA
• Sequence: 11 - ACUUGGUAGAACACGUAGUAAG - 32
• Evidence: experimental ; Illumina [1], SOLID [2]

Mature bmo-miR-2758-3p

• Accession: MIMAT0013630
• Description: Bombyx mori bmo-miR-2758-3p mature miRNA
• Sequence: 45 - CCCUGCGUGUUCUACCAAGUUA - 66
• Evidence: experimental ; Illumina [1], SOLID [2]

References

1. PubMed ID: 20199675
   MicroRNAs of Bombyx mori identified by Solexa sequencing
   Liu S, Li D, Li Q, Zhao P, Xiang Z, Xia Q
   BMC Genomics (2010) 11:148


2. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415