Accession
MI0013085
Description
Sus scrofa
ssc-let-7a-1 precursor miRNA
Literature search
51 open access papers mention ssc-let-7a-1
(157 sentences)
(157 sentences)
Sequence
126552802
reads,
58803.0
reads per million, 214 experiments
cccagguUGAGGUAGUAGGUUGUAUAGUUuagaauuguaucaagggagauaaCUGUACAGCCUCCUAGCUUUCCuugggu
((((((..(((.(((.((((((((((((.........((((......)))))))))))))))).))).)))..)))))).
((((((..(((.(((.((((((((((((.........((((......)))))))))))))))).))).)))..)))))).
Structure
- uU G U Uuagaauug aa cccagg GAG UAG AGGUUGUAUAGU uauc g |||||| ||| ||| |||||||||||| |||| ggguuC UUC AUC UCCGACAUGUCa auag g u CU G C --------- ag
Annotation confidence
High
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Genome context
chr9: 54378059-54378138 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ssc-let-7a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-let-7a-5p
| Accession | MIMAT0013865 |
| Description | Sus scrofa ssc-let-7a-5p mature miRNA |
| Sequence | 8 - UGAGGUAGUAGGUUGUAUAGUU - 29 |
| Evidence |
experimental
Illumina [1-2] |
Mature ssc-let-7a-1-3p
| Accession | MIMAT0052606 |
| Description | Sus scrofa ssc-let-7a-1-3p mature miRNA |
| Sequence | 53 - CUGUACAGCCUCCUAGCUUUCC - 74 |
| Evidence |
experimental
Illumina [1-2] |
References
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