Accession
MI0013109
Description
Sus scrofa
ssc-mir-27b precursor miRNA
Literature search
32 open access papers mention ssc-mir-27b
(87 sentences)
(87 sentences)
Sequence
7657
reads,
1970
reads per million, 14 experiments
acgaggugcAGAGCUUAGCUGAUUGGUGAACAgugacugguuuccgcuuugUUCACAGUGGCUAAGUUCUGCaccugaag
...(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))....
...(((((((((((((((((.((((.(((((((....(((...)))..))))))))))))))))))))))))))))....
Structure
-acg G G ugac u
aggugcAGAGCUUAGCU AUUG UGAACAg ugg
||||||||||||||||| |||| ||||||| ||| u
uccaCGUCUUGAAUCGG UGAC ACUUguu gcc
gaag - - --uc u
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr10: 31340880-31340959 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ssc-mir-27b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-27b-5p
| Accession | MIMAT0013889 |
| Description | Sus scrofa ssc-miR-27b-5p mature miRNA |
| Sequence | 10 - AGAGCUUAGCUGAUUGGUGAACA - 32 |
| Evidence |
experimental
Illumina [1,3-4] |
Mature ssc-miR-27b-3p
| Accession | MIMAT0013890 |
| Description | Sus scrofa ssc-miR-27b-3p mature miRNA |
| Sequence | 52 - UUCACAGUGGCUAAGUUCUGC - 72 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
References
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