Accession
MI0013112
Description
Sus scrofa
ssc-mir-23b precursor miRNA
Literature search
32 open access papers mention ssc-mir-23b
(55 sentences)
(55 sentences)
Sequence
6675054
reads,
3839.0
reads per million, 214 experiments
cucuggcugcuUGGGUUCCUGGCAUGCUGAUUUgugacuuaagauuaaaAUCACAUUGCCAGGGAUUACCAcgcagccac
...(((((((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))))))).
...(((((((.(((((((((((((((.((((((..............)))))))).))))))))))..))).))))))).
Structure
cuc u -- - C gugacu uggcugc UGG GUUCCUGGCA UG UGAUUU u ||||||| ||| |||||||||| || |||||| accgacg ACC UAGGGACCGU AC ACUAaa a --c c AU U - auuaga
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr10: 31341114-31341193 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ssc-mir-23b
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature ssc-miR-23b-5p
| Accession | MIMAT0052620 |
| Description | Sus scrofa ssc-miR-23b-5p mature miRNA |
| Sequence | 12 - UGGGUUCCUGGCAUGCUGAUUU - 33 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
Mature ssc-miR-23b-3p
| Accession | MIMAT0013893 |
| Description | Sus scrofa ssc-miR-23b-3p mature miRNA |
| Sequence | 50 - AUCACAUUGCCAGGGAUUACCA - 71 |
| Evidence |
experimental
Illumina [1,3-4], cloned [2] |
References
|
