Stem-loop ssc-mir-361

Accession

MI0013145

Description

Sus scrofa ssc-mir-361 precursor miRNA

Literature search

4 open access papers mention ssc-mir-361
(65 sentences)

Sequence

382 reads, 139 reads per million, 10 experiments

ggagcUUAUCAGAAUCUCCAGGGGUACuuauaauuugaaaaaguCCCCCAGGUGUGAUUCUGAUUUGCuuccuccuccuc
(((((..(((((((((.((.((((.((((...........)))).)))).))...)))))))))..))))).........

Structure

---------     UU         --U  A    U    auaa 
         ggagc  AUCAGAAUC   CC GGGG ACuu    u
         |||||  |||||||||   || |||| ||||    u
         cuuCG  UAGUCUUAG   GG CCCC ugaa    u
cuccuccuc     UU         UGU  A    C    aaag 

Annotation confidence Not enough data

Genome context

chrX: 78804780-78804859 [-]

Mature ssc-miR-361-5p

• Accession: MIMAT0013933
• Description: Sus scrofa ssc-miR-361-5p mature miRNA
• Sequence: 6 - UUAUCAGAAUCUCCAGGGGUAC - 27
• Evidence: experimental ; Illumina [1-3]

Mature ssc-miR-361-3p

• Accession: MIMAT0013934
• Description: Sus scrofa ssc-miR-361-3p mature miRNA
• Sequence: 45 - CCCCCAGGUGUGAUUCUGAUUUGC - 68
• Evidence: experimental ; Illumina [1-3]

References

1. PubMed ID: 19917043
   MicroRNA identity and abundance in porcine skeletal muscles determined by deep sequencing
   "Nielsen M, Hansen JH, Hedegaard J, Nielsen RO, Panitz F, Bendixen C, Thomsen B"
   "Anim Genet (2010) 41:159-168


2. PubMed ID: 21312241
   MicroRNA identity and abundance in developing swine adipose tissue as determined by Solexa sequencing
   "Li G, Li Y, Li X, Ning X, Li M, Yang G"
   "J Cell Biochem (2011) 112:1318-1328


3. PubMed ID: 24499489
   Exploration of microRNAs in porcine milk exosomes
   Chen T, Xi QY, Ye RS, Cheng X, Qi QE, Wang SB, Shu G, Wang LN, Zhu XT, Jiang QY, Zhang YL
   BMC Genomics (2014) 15:100