Stem-loop zma-MIR395k

Accession

MI0013219

Description

Zea mays zma-MIR395k precursor miRNA

Literature search

18 open access papers mention zma-MIR395k
(85 sentences)

Sequence

aGUUUCCUUCAAGCACUUCACAUggagcauucugucuuagagaaagcuuaauuuauugcauuGUGAAGUGUUUGAGGAAACUCu
((((((((.(((((((((((((((((((.((((.......)))).)))).........)).)))))))))))))))))))))..

Structure

--        U             -  ---------    a    gu 
  aGUUUCCU CAAGCACUUCACA Ug         gagc uucu  c
  |||||||| ||||||||||||| ||         |||| ||||  u
  UCAAAGGA GUUUGUGAAGUGu ac         uucg aaga  u
uC        -             u  guuauuuaa    a    ga 

Annotation confidence Not enough data

Genome context

chr10: 78600241-78600324 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from zma-MIR395k

Mature zma-miR395k-5p

• Accession: MIMAT0015343
• Description: Zea mays zma-miR395k-5p mature miRNA
• Sequence: 2 - GUUUCCUUCAAGCACUUCACAU - 23
• Evidence: not_experimental

Mature zma-miR395k-3p

• Accession: MIMAT0014008
• Description: Zea mays zma-miR395k-3p mature miRNA
• Sequence: 63 - GUGAAGUGUUUGAGGAAACUC - 83
• Evidence: not_experimental

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716