Stem-loop zma-MIR395l

Accession

MI0013220

Description

Zea mays zma-MIR395l precursor miRNA

Literature search

18 open access papers mention zma-MIR395l
(88 sentences)

Sequence

aGUUCCUUCCAAACACUUCACCAgcuaggccaugcacaagaugaacccacauuaggcuaGUGAAGUGUUUGGAGGAACUCu
(((((((.(((((((((((((.((((..((...))....((((......)))).)))).))))))))))))))))))))..

Structure

--       U             C    aggccaugcacaa    aa 
  aGUUCCU CCAAACACUUCAC Agcu             gaug  c
  ||||||| ||||||||||||| ||||             ||||   
  UCAAGGA GGUUUGUGAAGUG ucgg             uuac  c
uC       -             a    ------------a    ac 

Annotation confidence Not enough data

Genome context

chr10: 78600412-78600492 [-]

Clustered miRNAs

3 other miRNAs are < 10 kb from zma-MIR395l

Mature zma-miR395l-5p

• Accession: MIMAT0015344
• Description: Zea mays zma-miR395l-5p mature miRNA
• Sequence: 2 - GUUCCUUCCAAACACUUCACCA - 23
• Evidence: not_experimental

Mature zma-miR395l-3p

• Accession: MIMAT0014009
• Description: Zea mays zma-miR395l-3p mature miRNA
• Sequence: 60 - GUGAAGUGUUUGGAGGAACUC - 80
• Evidence: not_experimental

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716