Stem-loop zma-MIR482

Accession

MI0013238

Description

Zea mays zma-MIR482 precursor miRNA

Literature search

6 open access papers mention zma-MIR482
(14 sentences)

Sequence

3 reads, 0 reads per million, 3 experiments

agUGGGAGAUGAAGGAGCCUUgcaucgaugucaccgccggaggagcgcucgccuucuucgcgcaccgccgcaauagccgcccucggaccccucgccucgcUCUUCCUUGUUCCUCCCAUUuu
.(((((((...((((((....((..(((.(((...(((((((((((....).)))))))).))...((.((....)).)).....)))...)))....))..))))))....)))))))...

Structure

--a       -AUG      CCUU  --au   --u   -------------------acc  -        - g 
   gUGGGAG    AAGGAG    gc    cga   guc                      gc cggaggag c c
   |||||||    ||||||    ||    |||   |||                      || |||||||| |  
   UACCCUC    UUCCUU    cg    gcu   cag                      cg gcuucuuc g u
uuU       CUUG      --CU  cucc   ccc   gcucccgccgauaacgccgcca  c        c c 

Annotation confidence Not enough data

Genome context

LPUQ01000192.1: 319480-319601 [+]

Mature zma-miR482-5p

• Accession: MIMAT0015361
• Description: Zea mays zma-miR482-5p mature miRNA
• Sequence: 3 - UGGGAGAUGAAGGAGCCUU - 21
• Evidence: not_experimental

Mature zma-miR482-3p

• Accession: MIMAT0014027
• Description: Zea mays zma-miR482-3p mature miRNA
• Sequence: 101 - UCUUCCUUGUUCCUCCCAUU - 120
• Evidence: not_experimental

References

1. PubMed ID: 19936050
   A genome-wide characterization of microRNA genes in maize
   Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
   PLoS Genet (2009) 5:e1000716