miRBase entry: sbi-MIR169q

Stem-loop sbi-MIR169q


Accession
MI0013255
Description
Sorghum bicolor sbi-MIR169q precursor miRNA MIR169
Gene
family?
RF03311; MIR169

Literature search
4 open access papers mention sbi-MIR169q
(23 sentences)

Sequence

uUAGCCAAGAAUGGCUUGCCUAucuccauuauuuuguucaucgaugcaggccuagggaucgucauggaugaaauguggaugauggcauccauucuuggcuaagu
((((((((((((((..((((.((((((((.(((((((((((((((.(........).))))..)))))))))))))))).))))))).))))))))))))))..

Structure
--              CU    U   -     u           --    g agg 
  uUAGCCAAGAAUGG  UGCC Auc uccau auuuuguucau  cgau c   c
  ||||||||||||||  |||| ||| ||||| |||||||||||  |||| |    
  aaucgguucuuacc  acgg uag aggug uaaaguaggua  gcua g   c
ug              -u    -   u     -           cu    g gau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr8: 12317865-12317968 [-]

Database links

Mature sbi-miR169q

Accession MIMAT0014044
Description Sorghum bicolor sbi-miR169q mature miRNA
Sequence 2 - UAGCCAAGAAUGGCUUGCCUA - 22
Evidence not_experimental

References

  1. PubMed ID: 19936050
    A genome-wide characterization of microRNA genes in maize
    Zhang L, Chia JM, Kumari S, Stein JC, Liu Z, Narechania A, Maher CA, Guill K, McMullen MD, Ware D
    PLoS Genet (2009) 5:e1000716