Accession
MI0013315
Description
Citrus sinensis
csi-MIR166a precursor miRNA
Literature search
7 open access papers mention csi-MIR166a
(17 sentences)
(17 sentences)
Sequence
3988647
reads,
109619.0
reads per million, 16 experiments
gaagcuauuucuuuugaggGGAAUGUUGUCUGGCUCGAGgccacuaacuagaucuuugauuuaaucucaguugaucauauauuuguuucauuuuucuuccauaaaauuuaauuauauugagauacccaucauugaucuuaagauaauuaaguuagugacgUCGGACCAGGCUUCAUUCCCCccaauuauugcuucuaucugc
(((((........(((.((((((((..((((((.((((.(.(((((((((((((..((((...((((((((((((..((.((((...................)))).)))))).))))))))....))))..)))))...........)))))))).).)))).))))))..)))))))).))).....))))).......
(((((........(((.((((((((..((((((.((((.(.(((((((((((((..((((...((((((((((((..((.((((...................)))).)))))).))))))))....))))..)))))...........)))))))).).)))).))))))..)))))))).))).....))))).......
Structure
------- uauuucuu a UU C G c ----------- uu -uua - ca u guuucauu
gaagc uug ggGGAAUG GUCUGG UCGA g cacuaacu agauc ugau aucucagu ugau ua auuu u
||||| ||| |||||||| |||||| |||| | |||||||| ||||| |||| |||||||| |||| || |||| u
cuucg aac CCCCUUAC CGGACC GGCU c gugauuga ucuag acua uagaguua auua au uaaa u
cgucuau ---uuauu c UU A g a auuaauagaau uu ccca u -- u auaccuuc
Annotation confidence
High
Do you think this miRNA is real?
Genome context
chr5: 444262-444463 [-]
Database links
Mature csi-miR166a-5p
| Accession | MIMAT0037373 |
| Description | Citrus sinensis csi-miR166a-5p mature miRNA |
| Sequence | 20 - GGAAUGUUGUCUGGCUCGAG - 39 |
| Evidence |
experimental
Illumina [2] |
Mature csi-miR166a-3p
| Accession | MIMAT0014090 |
| Description | Citrus sinensis csi-miR166a-3p mature miRNA |
| Sequence | 161 - UCGGACCAGGCUUCAUUCCCC - 181 |
| Evidence |
experimental
Illumina [2] |
References
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