Stem-loop aae-mir-317-1

Accession

MI0013442

Description

Aedes aegypti aae-mir-317-1 precursor miRNA

Gene family

MIPF0000144; mir-317

Literature search

2 open access papers mention aae-mir-317-1
(6 sentences)

Sequence

362199 reads, 18155 reads per million, 2 experiments

gaggaauuucggcuaccgggauacacccugugcucgcuuugcauucgaaacuagUGAACACAGCUGGUGGUAUCUcaguggcccuaauccga
..(((.((..((((((.(((((((((((((((.(((((..............))))).)))))..))).))))))).))))))..)))))..

Structure

ga   a  uc      c       -   --     c     uugcau 
  gga uu  ggcuac gggauac acc  cugug ucgcu      u
  ||| ||  |||||| ||||||| |||  ||||| |||||       
  ccu aa  ccggug cUCUAUG UGG  GACAC AGUga      c
ag   -  uc      a       G   UC     A     ucaaag 

Annotation confidence Not enough data

Genome context

supercont1.153: 2154700-2154791 [-]

Mature aae-miR-317

• Accession: MIMAT0014224
• Description: Aedes aegypti aae-miR-317 mature miRNA
• Sequence: 55 - UGAACACAGCUGGUGGUAUCU - 75
• Evidence: experimental ; 454 [1]

References

1. PubMed ID: 19961592
   Direct sequencing and expression analysis of a large number of miRNAs in Aedes aegypti and a multi-species survey of novel mosquito miRNAs
   Li S, Mead EA, Liang S, Tu Z
   BMC Genomics (2009) 10:581


2. PubMed ID: 20167119
   Identification of microRNAs expressed in two mosquito vectors, Aedes albopictus and Culex quinquefasciatus
   Skalsky RL, Vanlandingham DL, Scholle F, Higgs S, Cullen BR
   BMC Genomics (2010) 11:119