Stem-loop gar-MIR2947

Accession

MI0013537

Description

Gossypium arboreum gar-MIR2947 precursor miRNA

Sequence

agcuuguuaagcgaaguuacguuaugggcaugguauggauugcuguuuuugaugauuuguugcuuucauuaacagcaaauUAUACCGUGCCCAUGACUGUAGcaucacucggcagcu
((((.(((.((.((.(((((((((((((((((((((((.((((((((..(((.............)))..)))))))).)))))))))))))))))).))))).)).)).)))))))

Structure

    u   a  c  a     -                  a        uu   ugauu 
agcu guu ag ga guuac guuaugggcaugguaugg uugcuguu  uga     u
|||| ||| || || ||||| |||||||||||||||||| ||||||||  |||     g
ucga cgg uc cu cGAUG CAGUACCCGUGCCAUAUu aacgacaa  acu     u
    -   c  a  a     U                  a        uu   uucgu 

Annotation confidence Not enough data

Genome context

Unknown

Mature gar-miR2947

• Accession: MIMAT0014330
• Description: Gossypium arboreum gar-miR2947 mature miRNA
• Sequence: 81 - UAUACCGUGCCCAUGACUGUAG - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19889219
   Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.)
   Pang M, Woodward AW, Agarwal V, Guan X, Ha M, Ramachandran V, Chen X, Triplett BA, Stelly DM, Chen ZJ
   Genome Biol (2009) 10:R122