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Genome-wide analysis reveals rapid and dynamic changes in miRNA and siRNA sequence and expression during ovule and fiber development in allotetraploid cotton (Gossypium hirsutum L.) |
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| PubMed ID | 19889219 |
| Authors | Pang M, Woodward AW, Agarwal V, Guan X, Ha M, Ramachandran V, Chen X, Triplett BA, Stelly DM, Chen ZJ |
| Journal | Genome Biol |
| Volume | 10 |
| Pages | R122 |
| Name | Accession | RPM | Chromosome | Start | End | Strand | Confidence |
|---|---|---|---|---|---|---|---|
| gra-MIR398 | MI0013535 | None | None | None | Medium | ||
| gra-MIR482 | MI0013536 | None | chr9 | 37350782 | 37350933 | + | Medium |
| gar-MIR2947 | MI0013537 | None | None | None | - | ||
| ghr-MIR164 | MI0013538 | 0 | None | None | High | ||
| ghr-MIR167a | MI0013539 | None | None | None | Medium | ||
| ghr-MIR172 | MI0013540 | None | None | None | High | ||
| ghr-MIR393 | MI0013541 | None | None | None | High | ||
| ghr-MIR394b | MI0013542 | None | None | None | High | ||
| ghr-MIR394a | MI0013543 | None | None | None | Low | ||
| ghr-MIR398 | MI0013544 | None | None | None | Medium | ||
| ghr-MIR479 | MI0013545 | 0 | None | None | High | ||
| ghr-MIR482a | MI0013546 | 0 | None | None | High | ||
| ghr-MIR482b | MI0013547 | 0 | None | None | Medium | ||
| ghr-MIR827a | MI0013548 | 408696 | None | None | High | ||
| ghr-MIR827b | MI0013549 | 408696 | None | None | High | ||
| ghr-MIR827c | MI0013550 | 34783 | None | None | High | ||
| ghr-MIR2948 | MI0013551 | 0 | None | None | High | ||
| ghr-MIR2949a | MI0013552 | None | None | None | High | ||
| ghr-MIR2949b | MI0013553 | 0 | None | None | High | ||
| ghr-MIR2949c | MI0013554 | 0 | None | None | High | ||
| ghr-MIR2950 | MI0013555 | None | None | None | High | ||
| ghr-MIR399c | MI0013556 | None | None | None | - | ||
| ghr-MIR399d | MI0013557 | None | None | None | - | ||
| ghr-MIR156a | MI0005638 | None | None | None | Medium | ||
| ghr-MIR156b | MI0005639 | None | None | None | Medium | ||
| ghr-MIR156c | MI0005640 | None | None | None | High | ||
| ghr-MIR156d | MI0005641 | None | None | None | High | ||
| ghr-MIR166b | MI0005645 | None | None | None | High | ||
| ghr-MIR390a | MI0005647 | 0 | None | None | High | ||
| ghr-MIR390b | MI0005648 | 0 | None | None | High | ||
| ghr-MIR390c | MI0005649 | 0 | None | None | High | ||
| ghr-MIR399a | MI0005652 | None | None | None | - | ||
| ghr-MIR399b | MI0005653 | None | None | None | - | ||
| ghr-MIR167b | MI0022545 | None | None | None | High | ||
| ghr-MIR399e | MI0022547 | None | None | None | - | ||
| ghr-MIR160 | MI0024179 | 0 | None | None | Medium |