Accession
MI0014633
Description
Arabidopsis lyrata
aly-MIR319d precursor miRNA
Sequence
4
reads,
139
reads per million, 1 experiments
auagauagauauaugaaucgagauuaaaauagauagauauagaaGGAGAUUCUUUCAGUCCAGUCauggauagaaaaagaagaggguagaaauaucugccgacucauccauccaaacacucgugguagagaaacgaucaauuuuaaaccgcagugacuguaugaaugaugcgggagauauuuuugauccuucuuuaucuguguUUGGACUGAAGGGAGCUCCUUcuuuuucuacaauuuuuucauuuuuuucucaucaucuguuuau
(((((((((....(((...((((..(((((.((((((...((((((((.((((((((((((((.((((((((....((((((.((.(((((((((((.(((..((((.(((.((..((((.(((((..((((........))))..)))))))))..)).))).))))..))).))))))))))).)))))))))))))))).)))))))))))))).))))))))...))))........)))))))..)))).))))))))))))
(((((((((....(((...((((..(((((.((((((...((((((((.((((((((((((((.((((((((....((((((.((.(((((((((((.(((..((((.(((.((..((((.(((((..((((........))))..)))))))))..)).))).))))..))).))))))))))).)))))))))))))))).)))))))))))))).))))))))...))))........)))))))..)))).))))))))))))
Structure
uaua auc uu a -------- uau A U gaaa a g g ac c c aa c ag acg
auagauaga uga gaga aaaau ga uaga agaaGGAG UUCUUUCAGUCCAG Cauggaua aagaag gg uagaaauaucu ccg ucau cau ca cacu guggu agaa a
||||||||| ||| |||| ||||| || |||| |||||||| |||||||||||||| |||||||| |||||| || ||||||||||| ||| |||| ||| || |||| ||||| ||||
uauuugucu acu cucu uuuua cu aucu ucUUCCUC AGGGAAGUCAGGUU gugucuau uucuuc cu guuuuuauaga ggc agua gua gu guga cgcca uuuu u
---- --a uu - uuuuuaac uuu G u ---- - a g gu a u ca - aa aac
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348716.1: 18166558-18166824 [+]
Database links
Mature aly-miR319d-5p
| Accession | MIMAT0017663 |
| Description | Arabidopsis lyrata aly-miR319d-5p mature miRNA |
| Sequence | 45 - GGAGAUUCUUUCAGUCCAGUC - 65 |
| Evidence |
experimental
Illumina [1] |
Mature aly-miR319d-3p
| Accession | MIMAT0017664 |
| Description | Arabidopsis lyrata aly-miR319d-3p mature miRNA |
| Sequence | 204 - UUGGACUGAAGGGAGCUCCUU - 224 |
| Evidence |
experimental
Illumina [1] |
References
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