Accession
MI0014647
Description
Arabidopsis lyrata
aly-MIR853 precursor miRNA
Sequence
30835
reads,
1330.0
reads per million, 11 experiments
aggguaaagcguuccugcugcUAUCCUUUUCCUGUUGCAGAAGccauuaaauaucuuucucuucugggucucaagagcaccugcguuauuaucaaguuuuucaaguaucucuuaaagaacuuugggauuucaagaucuucuccuagauguuuuggaagaagagugccuuuaaucuaagaaaugaucuugagacccgaaguuuuuugaagagaaaccuaaaaacuugauaucaacgaaugugcucuuacacgcaacauuccuccuuaugaugcaucagcaacaacuccuuggaaaccauacccuuuagaaaagaucauugaaaauggagaauggaacuuacucaacgauauuuccuggcuUCUGCAACCGGAAAGGGGAGCagcaugaaacucu
(((((......(((.(((((((.(((((((((.(((((((((((((..(((((((..(((.((((((((...((((((((...((((..((((((((((((...((.(((((((((((((((((((.((((((((((...((.(((((.....((..........))....))))).))...)))))))))))))))))))))))).))))).))..))))))))))))..))))...))))))))..........((((......((.(((....))).)).......)))).....))))...)))).))).((((...))))(((...........)))...)))))))..))))))))))))).)))))))))))))))).))))))))
(((((......(((.(((((((.(((((((((.(((((((((((((..(((((((..(((.((((((((...((((((((...((((..((((((((((((...((.(((((((((((((((((((.((((((((((...((.(((((.....((..........))....))))).))...)))))))))))))))))))))))).))))).))..))))))))))))..))))...))))))))..........((((......((.(((....))).)).......)))).....))))...)))).))).((((...))))(((...........)))...)))))))..))))))))))))).)))))))))))))))).))))))))
Structure
aaagcg c A U uu ------------------------------uu c --- -------------------------------------------------cuc cug au caa a - a uuc c guuuu aaga
agggu uuc ugcugcU UCCUUUUCC GUUGCAGAAGcca aaauauc ucu uucu gggu aagagcac cguu uaucaaguuuuu gu ucucu uaaagaacuuuggg uuucaagauc uc uagau gg a
||||| ||| ||||||| ||||||||| ||||||||||||| ||||||| ||| |||| |||| |||||||| |||| |||||||||||| || ||||| |||||||||||||| |||||||||| || ||||| ||
ucuca aag acgaCGA GGGGAAAGG CAACGUCUucggu uuuauag aga aaga ccca uucucgug gcaa auaguucaaaaa ca agaga guuuuuugaagccc agaguucuag ag aucua cc g
------ u - C cc caacucauucaagguaagagguaaaaguuacu a uuu uaccaaagguuccucaacaacgacuacguaguauuccuccuuacaacgcaca uaa cu -uc a a - uaa a -auuu guga
Annotation confidence
High
Do you think this miRNA is real?
Genome context
GL348715.1: 10691977-10692369 [+]
Database links
Mature aly-miR853-5p
| Accession | MIMAT0017693 |
| Description | Arabidopsis lyrata aly-miR853-5p mature miRNA |
| Sequence | 22 - UAUCCUUUUCCUGUUGCAGAAG - 43 |
| Evidence |
experimental
Illumina [1] |
Mature aly-miR853-3p
| Accession | MIMAT0017694 |
| Description | Arabidopsis lyrata aly-miR853-3p mature miRNA |
| Sequence | 360 - UCUGCAACCGGAAAGGGGAGC - 380 |
| Evidence |
experimental
Illumina [1] |
References
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