Accession
MI0014654
Description
Arabidopsis lyrata
aly-MIR3438 precursor miRNA
Sequence
8577
reads,
791.0
reads per million, 12 experiments
cgaguuugucggaucgaucuauuuuaacucggguaagcuagauuucauucguuuuguuucaccaaucacaaguuaucguuuaugcUCCAUAGCUUCAUCUCUGACCCaagaucuuguuuaugcauaauuuuuuauuuuacaacaaaaucaugagUCAAGGAUUAAGCUAUGAagcuuaaacauaacuuguauuuguucuacauaauuugcguuugauuuggaucuagaggccuuuuaaucaauaucuugucuuuacauauuucg
((((((....(((....))).....))))))(((...((((((((((..(((..(((.....(((..(((((((((.(((((.(((.((((((((.((((.((((.((.(((.(((((.....((((....)))).....))))).))).)).)))).)))).)))))))).))).))))))))))))))..)))....)))......)))..)))....)))))))..)))................................
((((((....(((....))).....))))))(((...((((((((((..(((..(((.....(((..(((((((((.(((((.(((.((((((((.((((.((((.((.(((.(((((.....((((....)))).....))))).))).)).)))).)))).)))))))).))).))))))))))))))..)))....)))......)))..)))....)))))))..)))................................
Structure
-cgaguuugucggaucgaucuauuuuaacucg aag ---- uu ----uu uucac uc c u C C C C a c uaugc u
ggu cuagauu uca cgu ugu caa acaaguuau guuua gcU CAUAGCUU AUCU UGAC Ca gau uuguu auaa u
||| ||||||| ||| ||| ||| ||| ||||||||| ||||| ||| |||||||| |||| |||| || ||| ||||| ||||
ccg gaucuag agu gcg aca guu uguucaaua caaau cga GUAUCGAA UAGG ACUg gu cua aacaa uauu u
gcuuuauacauuucuguucuauaacuaauuuu -ga guuu uu uuuaau -ucuu ua - u A U A a a a cauuu u
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
GL348715.1: 4344618-4344881 [-]
Database links
Mature aly-miR3438-5p
| Accession | MIMAT0017708 |
| Description | Arabidopsis lyrata aly-miR3438-5p mature miRNA |
| Sequence | 86 - UCCAUAGCUUCAUCUCUGACCC - 107 |
| Evidence |
experimental
Illumina [1] |
Mature aly-miR3438-3p
| Accession | MIMAT0017707 |
| Description | Arabidopsis lyrata aly-miR3438-3p mature miRNA |
| Sequence | 155 - UCAAGGAUUAAGCUAUGA - 172 |
| Evidence |
experimental
Illumina [1] |
References
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