Stem-loop gga-mir-3534

Accession

MI0015387

Description

Gallus gallus gga-mir-3534 precursor miRNA

Sequence

12 reads, 0 reads per million, 4 experiments

ugggacugggggggUGUGGGUUGACAGUGCUGAGGUcuccccaagcccccgagcucugcugccccacaucucccccccccca
((((...(((((((((((((....(((.(((..(((........)))....))).)))....)))))))))))))...))))

Structure

    acu             UUGA   U   --GA   cuc 
uggg   gggggggUGUGGG    CAG GCU    GGU   c
||||   |||||||||||||    ||| |||    |||    
accc   ccccucuacaccc    guc cga    ccg   c
    ccc             cguc   u   gccc   aac 

Annotation confidence Low

Genome context

KQ759641.1: 1842-1923 [-]

Mature gga-miR-3534

• Accession: MIMAT0016385
• Description: Gallus gallus gga-miR-3534 mature miRNA
• Sequence: 15 - UGUGGGUUGACAGUGCUGAGGU - 36
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19891781
   Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach
   Wang Y, Brahmakshatriya V, Zhu H, Lupiani B, Reddy SM, Yoon BJ, Gunaratne PH, Kim JH, Chen R, Wang J, Zhou H
   BMC Genomics (2009) 10:512