Stem-loop gga-mir-3537

Accession

MI0015390

Description

Gallus gallus gga-mir-3537 precursor miRNA

Sequence

8 reads, 0 reads per million, 4 experiments

gguggaggGUGAGUGCUGUAGGAUGGGGCUCccggcccuacggcugggcugcuccccugccccucacucccuucccc
((.((((((.(((((..(((((..(((((.(((((((....)))))))..))))))))))....)))))))))))))

Structure

  u      U     --CU     AU     -U       c 
gg ggaggG GAGUG    GUAGG  GGGGC  Cccggcc u
|| |||||| |||||    |||||  |||||  |||||||  
cc ccuucc cucac    cgucc  ccucg  gggucgg a
  -      -     uccc     --     uc       c 

Annotation confidence Low

Genome context

chr6: 16941072-16941148 [+]

Mature gga-miR-3537

• Accession: MIMAT0016388
• Description: Gallus gallus gga-miR-3537 mature miRNA
• Sequence: 9 - GUGAGUGCUGUAGGAUGGGGCUC - 31
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 19891781
   Identification of differentially expressed miRNAs in chicken lung and trachea with avian influenza virus infection by a deep sequencing approach
   Wang Y, Brahmakshatriya V, Zhu H, Lupiani B, Reddy SM, Yoon BJ, Gunaratne PH, Kim JH, Chen R, Wang J, Zhou H
   BMC Genomics (2009) 10:512