Accession
MI0015500
Description
Ciona intestinalis
cin-mir-4000a-1 precursor miRNA
Sequence
18428
reads,
5788
reads per million, 2 experiments
CGAAACUUGCGUGGAACAGGcuguuagaauccaGCCUUUUCAUGUAAAUUUCCAU
.((((.((((((((((.((((((........)))))))))))))))).))))...
.((((.((((((((((.((((((........)))))))))))))))).))))...
Structure
--C C C uua GAAA UUGCGUGGAA AGGcug g |||| |||||||||| |||||| CUUU AAUGUACUUU UCCGac a UAC A - cua
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
7q: 5398797-5398851 [-]
Clustered miRNAs
12 other miRNAs are < 10 kb from cin-mir-4000a-1
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4000a-3p
| Accession | MIMAT0016431 |
| Description | Ciona intestinalis cin-miR-4000a-3p mature miRNA |
| Sequence | 34 - GCCUUUUCAUGUAAAUUUCCAU - 55 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4000a-5p
| Accession | MIMAT0016430 |
| Description | Ciona intestinalis cin-miR-4000a-5p mature miRNA |
| Sequence | 1 - CGAAACUUGCGUGGAACAGG - 20 |
| Evidence |
References
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