miRBase entry: cin-mir-4016-2

Stem-loop cin-mir-4016-2


Accession
MI0015564
Description
Ciona intestinalis cin-mir-4016-2 precursor miRNA


Sequence

18 reads, 6 reads per million, 2 experiments
UGUUCUGUGAUCUUAAAGGacgagacagacaaaaccuuuaagaucacaaaaca
((((.((((((((((((((...............)))))))))))))).))))

Structure
    C              acgaga 
UGUU UGUGAUCUUAAAGG      c
|||| ||||||||||||||      a
acaa acacuagaauuucc      g
    a              aaaaca 


Annotation confidence Not enough data
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Genome context
9p: 306147-306199 [-]

Database links

Mature cin-miR-4016

Accession MIMAT0016522
Description Ciona intestinalis cin-miR-4016 mature miRNA
Sequence 1 - UGUUCUGUGAUCUUAAAGG - 19
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39