Accession
MI0015592
Description
Ciona intestinalis
cin-mir-4041 precursor miRNA
Sequence
293
reads,
117
reads per million, 2 experiments
CAGUGAUUCAAGUCCUAUCUgcugcuucaucggCAAUAGGUCUUUAAUCAUUG
((((((((.(((.(((((.(((((......)))))))))).))).))))))))
((((((((.(((.(((((.(((((......)))))))))).))).))))))))
Structure
C U C cu
CAGUGAUU AAG CCUAU Ugcug u
|||||||| ||| ||||| |||||
GUUACUAA UUC GGAUA ACggc c
U U - ua
Annotation confidence
High
Do you think this miRNA is real?
Genome context
3p: 2002875-2002927 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from cin-mir-4041
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature cin-miR-4041-5p
| Accession | MIMAT0016571 |
| Description | Ciona intestinalis cin-miR-4041-5p mature miRNA |
| Sequence | 1 - CAGUGAUUCAAGUCCUAUCU - 20 |
| Evidence |
experimental
Illumina [1] |
Mature cin-miR-4041-3p
| Accession | MIMAT0016572 |
| Description | Ciona intestinalis cin-miR-4041-3p mature miRNA |
| Sequence | 34 - CAAUAGGUCUUUAAUCAUUG - 53 |
| Evidence |
experimental
Illumina [1] |
References
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