miRBase entry: cin-mir-4095

Stem-loop cin-mir-4095


Accession
MI0015648
Description
Ciona intestinalis cin-mir-4095 precursor miRNA


Sequence

46 reads, 19 reads per million, 2 experiments
CUUCCCUGGGGGUGCUGGUAgcuugguacaaucugcuaucaccacacccgggcaaa
....((((((.(((.(((((((..(((...))).))))))).))).))))))....

Structure
CUUC      G   C       uu   a 
    CCUGGG GUG UGGUAgc  ggu  
    |||||| ||| |||||||  ||| c
    gggccc cac acuaucg  cua  
aaac      a   c       -u   a 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
10p: 1800413-1800468 [-]

Database links

Mature cin-miR-4095-5p

Accession MIMAT0016676
Description Ciona intestinalis cin-miR-4095-5p mature miRNA
Sequence 1 - CUUCCCUGGGGGUGCUGGUA - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39