Stem-loop cin-mir-4101

Accession

MI0015654

Description

Ciona intestinalis cin-mir-4101 precursor miRNA

Sequence

1 reads, 1 reads per million, 1 experiments

gugcgccuauauaaucuaccguuacuuuuauuggguacguUAGGUUGUUGUAUAUGUGG
...(((.(((((((((((.(((..((......))..))).)))))...)))))).))).

Structure

gug   c      ---     c   ua  uu 
   cgc uauaua   aucua cgu  cu  u
   ||| ||||||   ||||| |||  ||   
   GUG AUAUGU   UGGAU gca  gg  a
--G   U      UGU     u   ug  uu 

Annotation confidence Not enough data

Genome context

14p: 1000821-1000879 [-]

Mature cin-miR-4101-3p

• Accession: MIMAT0016686
• Description: Ciona intestinalis cin-miR-4101-3p mature miRNA
• Sequence: 41 - UAGGUUGUUGUAUAUGUGG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39