miRBase entry: cin-mir-4106

Stem-loop cin-mir-4106


Accession
MI0015660
Description
Ciona intestinalis cin-mir-4106 precursor miRNA


Sequence

7 reads, 2 reads per million, 2 experiments
aagauuccaucauguuuugcauuuuuuugUAAAAUAUUGGUUUAGUUUUU
((((((..(((((((((((((......))))))))).))))..)))))).

Structure
-      cc    -         uu 
 aagauu  auca uguuuugca  u
 ||||||  |||| |||||||||   
 UUUUGA  UGGU AUAAAAUgu  u
U      UU    U         uu 


Annotation confidence Not enough data
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Genome context
13q: 2263000-2263049 [-]

Database links

Mature cin-miR-4106-3p

Accession MIMAT0016693
Description Ciona intestinalis cin-miR-4106-3p mature miRNA
Sequence 30 - UAAAAUAUUGGUUUAGUUUUU - 50
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39