miRBase entry: cin-mir-4116

Stem-loop cin-mir-4116


Accession
MI0015670
Description
Ciona intestinalis cin-mir-4116 precursor miRNA


Sequence

3 reads, 2 reads per million, 2 experiments
GGGGCAAGAUGGGAUUUUgugcuaacgguaucgaucuuacccc
((((.(((((..(((.((((....)))).))).))))).))))

Structure
    C     GG   U    g 
GGGG AAGAU  GAU UUgu c
|||| |||||  ||| ||||  
cccc uucua  cua ggca u
    a     -g   u    a 


Annotation confidence Not enough data
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Genome context
13q: 2094121-2094163 [-]

Database links

Mature cin-miR-4116-5p

Accession MIMAT0016707
Description Ciona intestinalis cin-miR-4116-5p mature miRNA
Sequence 1 - GGGGCAAGAUGGGAUUUU - 18
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39