Stem-loop cin-mir-4121

Accession

MI0015675

Description

Ciona intestinalis cin-mir-4121 precursor miRNA

Sequence

acauaacacuccccaaugcgacaaaggacuagaucuGUGUUGGAGUUGGGUUUGU
...........((((((.(((((..(((.....))).)))))..)))))).....

Structure

acauaacacuc      -g     aa   c 
           cccaau  cgaca  gga u
           ||||||  |||||  ||| a
           GGGUUG  GUUGU  ucu g
------UGUUU      AG     -G   a 

Annotation confidence Not enough data

Genome context

8q: 7015325-7015379 [+]

Mature cin-miR-4121-3p

• Accession: MIMAT0016713
• Description: Ciona intestinalis cin-miR-4121-3p mature miRNA
• Sequence: 37 - GUGUUGGAGUUGGGUUUGU - 55
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39