Stem-loop cin-mir-4122

Accession

MI0015676

Description

Ciona intestinalis cin-mir-4122 precursor miRNA

Sequence

4 reads, 2 reads per million, 1 experiments

uguuucaaauggacuucauggaaauguuucauaacauuaauuaugauCUAAGUUUGUUUGAAGCA
(((((((((((((((((((((.((((((....))))))..))))))....)))))))))))))))

Structure

               ----      -a      u 
uguuucaaauggacu    ucaugg  aauguu c
|||||||||||||||    ||||||  ||||||  
ACGAAGUUUGUUUGA    aguauu  uuacaa a
               AUCu      aa      u 

Annotation confidence Not enough data

Genome context

14q: 2629820-2629884 [-]

Mature cin-miR-4122-3p

• Accession: MIMAT0016714
• Description: Ciona intestinalis cin-miR-4122-3p mature miRNA
• Sequence: 48 - CUAAGUUUGUUUGAAGCA - 65
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39