miRBase entry: cin-mir-4132

Stem-loop cin-mir-4132


Accession
MI0015687
Description
Ciona intestinalis cin-mir-4132 precursor miRNA


Sequence

14 reads, 5 reads per million, 2 experiments
CAAUGCAAAAAGGCCAUUUGugucgaauaacAAAUUGCUGAUGUUGUAUUA
.(((((((...(((.((((((........)))))).)))....))))))).

Structure
C       -AAA   C      guc 
 AAUGCAA    GGC AUUUGu   g
 |||||||    ||| ||||||    
 UUAUGUU    UCG UAAAca   a
A       GUAG   U      aua 


Annotation confidence Not enough data
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Genome context
7q: 4818326-4818376 [+]

Database links

Mature cin-miR-4132-5p

Accession MIMAT0016728
Description Ciona intestinalis cin-miR-4132-5p mature miRNA
Sequence 1 - CAAUGCAAAAAGGCCAUUUG - 20
Evidence experimental
Illumina [1]

Mature cin-miR-4132-3p

Accession MIMAT0016729
Description Ciona intestinalis cin-miR-4132-3p mature miRNA
Sequence 32 - AAAUUGCUGAUGUUGUAUUA - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39