miRBase entry: cin-mir-4134

Stem-loop cin-mir-4134


Accession
MI0015689
Description
Ciona intestinalis cin-mir-4134 precursor miRNA


Sequence

21 reads, 8 reads per million, 2 experiments
UAAAAACAGGCAGUGUAAAUauguuauguguauuuacagugaauguuuua
..((((((..((.(((((((((.......))))))))).))..)))))).

Structure
UA      GG  G         gu 
  AAAACA  CA UGUAAAUau  u
  ||||||  || |||||||||  a
  uuuugu  gu acauuuaug  u
-a      aa  g         ug 


Annotation confidence Not enough data
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Genome context
3q: 1306918-1306967 [+]

Database links

Mature cin-miR-4134-5p

Accession MIMAT0016731
Description Ciona intestinalis cin-miR-4134-5p mature miRNA
Sequence 1 - UAAAAACAGGCAGUGUAAAU - 20
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39