miRBase entry: cin-mir-4137

Stem-loop cin-mir-4137


Accession
MI0015692
Description
Ciona intestinalis cin-mir-4137 precursor miRNA


Sequence

4 reads, 2.0 reads per million, 1 experiments
uuguuaaauuacuauuaauaugaauuaaagcuuaaauuugGGUGGUAAUUGCAUAGGGG
..................(((((((((..(((((....)))))..))))).))))....

Structure
uuguuaaauuacuauuaa    -     aa     a 
                  uaug aauua  gcuua a
                  |||| |||||  |||||  
                  AUAC UUAAU  UGGgu u
--------------GGGG    G     GG     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
ref|NC_020174.1|: 346489-346547 [+]

Database links

Mature cin-miR-4137-3p

Accession MIMAT0016734
Description Ciona intestinalis cin-miR-4137-3p mature miRNA
Sequence 41 - GGUGGUAAUUGCAUAGGGG - 59
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39