Stem-loop cin-mir-4146

Accession

MI0015701

Description

Ciona intestinalis cin-mir-4146 precursor miRNA

Sequence

cuuauuggcaagaauuuugcuggccaaaguuuuguuaagAAAAUUUCUUGCCAGGAGAG
(((..(((((((((.(((.((...(((....)))...)).))).))))))))).)))..

Structure

--   au         u   g  ggc   a 
  cuu  uggcaagaa uuu cu   caa g
  |||  ||||||||| ||| ||   |||  
  GAG  ACCGUUCUU AAA ga   guu u
GA   -G         U   A  auu   u 

Annotation confidence Not enough data

Genome context

2q: 4695598-4695656 [-]

Mature cin-miR-4146-3p

• Accession: MIMAT0016749
• Description: Ciona intestinalis cin-miR-4146-3p mature miRNA
• Sequence: 40 - AAAAUUUCUUGCCAGGAGAG - 59
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39