Stem-loop cin-mir-4153

Accession

MI0015708

Description

Ciona intestinalis cin-mir-4153 precursor miRNA

Sequence

1 reads, 1 reads per million, 1 experiments

gacgucacuauccgcgggcguuucgugauauacauacucgaaaAUCGCGUUUGGUUACGUC
(((((.((((..(((((...(((((.............))))).)))))..)))).)))))

Structure

     c    uc     gcg     ugaua 
gacgu acua  cgcgg   uuucg     u
||||| ||||  |||||   |||||     a
CUGCA UGGU  GCGCU   aaagc     c
     U    UU     --A     ucaua 

Annotation confidence Not enough data

Genome context

scaffold_197: 55379-55439 [-]

Mature cin-miR-4153-3p

• Accession: MIMAT0016757
• Description: Ciona intestinalis cin-miR-4153-3p mature miRNA
• Sequence: 44 - AUCGCGUUUGGUUACGUC - 61
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39