Stem-loop cin-mir-4160

Accession

MI0015715

Description

Ciona intestinalis cin-mir-4160 precursor miRNA

Sequence

uuaugauggaaugaucaacgaaugGAAGAUUGAAACAAACAUGG
.....(((......(((((........).))))......)))..

Structure

uuaug   gaauga    - gaa 
     aug      ucaa c   u
     |||      |||| |    
     UAC      AGUU G   g
---GG   AAACAA    A AAG 

Annotation confidence Not enough data

Genome context

1q: 291994-292037 [-]

Mature cin-miR-4160-3p

• Accession: MIMAT0016766
• Description: Ciona intestinalis cin-miR-4160-3p mature miRNA
• Sequence: 25 - GAAGAUUGAAACAAACAUGG - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39