miRBase entry: cin-mir-4164

Stem-loop cin-mir-4164


Accession
MI0015719
Description
Ciona intestinalis cin-mir-4164 precursor miRNA


Sequence

acgguaauauauuuaaaauuugaagcauuuuaUCUUUGUUAUGUCAGCUGU
(((((.(((((....(((..((((....))))..)))..)))))..)))))

Structure
     -a     uuua   uu    g 
acggu  auaua    aaa  ugaa c
|||||  |||||    |||  ||||  
UGUCG  UGUAU    UUU  auuu a
     AC     --UG   CU    u 


Annotation confidence Not enough data
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Genome context
scaffold_63: 92938-92988 [+]

Database links

Mature cin-miR-4164-3p

Accession MIMAT0016772
Description Ciona intestinalis cin-miR-4164-3p mature miRNA
Sequence 33 - UCUUUGUUAUGUCAGCUGU - 51
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20370911
    miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
    Hendrix D, Levine M, Shi W
    Genome Biol (2010) 11:R39