Stem-loop cin-mir-4167

Accession

MI0015722

Description

Ciona intestinalis cin-mir-4167 precursor miRNA

Sequence

3 reads, 3 reads per million, 1 experiments

UUAGUAGAGUGGAAUGCCaagcaaauauuucaacgcuucaauauauuucaucacugu
.((((.((.(((((((..((((............)))).....))))))))))))).

Structure

U    A  G       ---CC    aaaua 
 UAGU GA UGGAAUG     aagc     u
 |||| || |||||||     ||||      
 guca cu acuuuau     uucg     u
u    -  -       auaac    caacu 

Annotation confidence Not enough data

Genome context

Unknown

Mature cin-miR-4167-5p

• Accession: MIMAT0016775
• Description: Ciona intestinalis cin-miR-4167-5p mature miRNA
• Sequence: 1 - UUAGUAGAGUGGAAUGCC - 18
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20370911
   miRTRAP, a computational method for the systematic identification of miRNAs from high throughput sequencing data
   Hendrix D, Levine M, Shi W
   Genome Biol (2010) 11:R39